QuestionQuestion

Create a program that takes two sequences (genetic sequences) as input and can determine if there is a 100% match between the sequences. It should be able to conduct a pairwise comparison of two sequences. The code should output start and end positions of each occurrence of a match.

Also a FASTA sequence will be used as input.

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def readgene(filename):
    infile = open(filename, "r")

    seq = "";
    while True:
       line = infile.readline()
       if (line==""):
            break

       if (line[0] != '>'):
            seq += line[:-1]    # to avoid \n character at the end of the line

    return seq

#gene1_filename = "titin_conserved.txt"
gene1_filename = input("Enter the query filename:")
#gene2_filename = "titin_full.txt"
gene2_filename = input("Enter the ref. filename:")...

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