Find the global alignment for the sequences given below using Dynamic Programming. Show the matrix of the alignment and backtracking path for full credit. Parameters of the alignment are: match score = 2, mismatch score is -1, and gap penalty is 3.

Solution PreviewSolution Preview

These solutions may offer step-by-step problem-solving explanations or good writing examples that include modern styles of formatting and construction of bibliographies out of text citations and references. Students may use these solutions for personal skill-building and practice. Unethical use is strictly forbidden.

Global Alignment Problem
The dynamic programming algorithm based on Needleman-Wunsch’s approach has produced the below cost matrix. The final cost is the last element (bottom right), namely 19.
The 1st row and 1st column below are the initial conditions, where the elements are computed using the formula F[0,j] = -3j & F[i,0]= -3i (3 is the gap penalty).
Each string has 22 characters, so the values there are in the [0, -66] range (the top-left element is 0).
The remaining elements were computed as follows:...

By purchasing this solution you'll be able to access the following files:

for this solution

or FREE if you
register a new account!

PayPal, G Pay, ApplePay, Amazon Pay, and all major credit cards accepted.

Find A Tutor

View available Data Structures and Algorithms Tutors

Get College Homework Help.

Are you sure you don't want to upload any files?

Fast tutor response requires as much info as possible.

Upload a file
Continue without uploading

We couldn't find that subject.
Please select the best match from the list below.

We'll send you an email right away. If it's not in your inbox, check your spam folder.

  • 1
  • 2
  • 3
Live Chats